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Prediction of Protein Structural Classes: Features Extraction to Classification Algorithm

[ Vol. 18 , Issue. 5 ]

Author(s):

Xiaoqing Liu, Zhenyu Yang, Yaoxin Wang and Qi Dai*   Pages 635 - 645 ( 11 )

Abstract:


The fast growth of protein sequencing and protein structure data has promoted the development of the protein structural class prediction. Several prediction methods have been proposed to study protein folding rate, DNA binding sites, as well as reducing the search of conformational space and realizing the prediction of tertiary structure. This paper introduces the current approaches of protein structural class prediction and emphasizes their steps from information extraction to classification algorithms.

Keywords:

Sequence feature, secondary structural characteristic, classification algorithm, protein structural class prediction, DNA, Blast.

Affiliation:

College of Sciences, Hangzhou Dianzi University, Hangzhou 310018, College of Life Sciences and Medicine, Zhejiang Sci-Tech University, Hangzhou 310018, College of Life Sciences and Medicine, Zhejiang Sci-Tech University, Hangzhou 310018, College of Life Sciences and Medicine, Zhejiang Sci-Tech University, Hangzhou 310018



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