E-Pub Full Text Articles

Proteomic Analysis of Intra- and Extracellular Proteins of Aspergillus niveus during Submerged Bioprocess Culturing under Different pH Conditions

Author(s): Juliana Abigail Leite, Nathalia Gonsales da Rosa-Garzon, Helen Julie Laure, José Cesar Rosa, Octavio Luiz Franco, Cristina Maria de Souza Motta and Hamilton Cabral*
Pages: 1-14 (14)
Identifying protein subcellular location with embedding features learned from networks

Author(s): Hongwei Liu, Bin Hu, Lei Chen* and Lin Lu
Pages: 1-17 (17)
A bottom-up proteomic approach in bone marrow plasma cells of newly diagnosed multiple myeloma patients

Author(s): Beycan Ayhan, Seçil Karahisar Turan, N. Pınar Barkan, Klara Dalva, Meral Beksaç and Duygu Özel Demiralp*
Pages: 1-13 (13)
Neurochemical Changes in Brain After Fetal Exposure to Fluoxetine, a Serotonin Reuptake Inhibitor (SRI) in Rodents

Author(s): Mona Awad Alonazi, Amina El Gezeery, Afaf el-Ansary and Ramesa Shafi Bhat*
Pages: 1-6 (6)
Quantitative Proteomic Study of Peripheral Blood Monocytes Identified Novel Genes Involved in Osteoporosis

Author(s): Qing Xu*, Li Xu, Pei He, Yang-Hua Sun, Xin Lu, Shu-Feng Lei and Fei-Yan Deng
Pages: 1-16 (16)
ITRAQ-based proteomic analysis of the rat pancreas following gastric bypass surgery

Author(s): Zhuolin Xie, Lu Bai, Xiang Gao, Liyong Zhu, Shaihong Zhu, Weizheng Li and Pengzhou Li*
Pages: 1-13 (13)
Bioinformatics-based identification of Selective Cationic Amphipatic Antibacterial Peptides: Aurein 1.2 variants case

Author(s): Carlos Polanco*, Alberto Huberman, Vladimir N. Uversky, Leire Andrés, Thomas Buhse, Jorge Alberto Castañón-González and Juan Luciano Dı́az-González
Pages: 1-16 (16)
Comparative Proteome Profiles of Methicillin-Resistant Staphylococcus aureus in Response to Vanillic Acid and 2-Hydroxycinnamic Acid

Author(s): Deniz Keman* and Ferda Soyer
Pages: 1-17 (17)
A Refined Framework for Precision and Translational Proteomics in Clinical Research

Author(s): Min Wang, Daozhen Chen, Yankai Xia, Tao Zhou* and Shi-Wen Jiang
Pages: 1-12 (12)
Inflammatory Cytokines Correlate with Dry Eye Indexes Estimated by Keratograph in Healthy Subjects

Author(s): May N. Al-Muammar, Rania Fahmy, Mona Alonazi, Ramesa Shafi Bhat and Afaf El-Ansary*
Pages: 1-11 (11)
In silico Docking Studies of Vascular Endothelial Growth Factor-A (VEGFA): Possible Implications in Chronic Myeloid Leukemia (CML) Therapy

Author(s): Samyuktha Lakkireddy, Archana Jayaraman, Sangeetha Aula, Atya Kapley, Vijay Kumar Kutala and Kaiser Jamil*
Pages: 1-14 (14)
Machine Learning for Mass Spectrometry Data Analysis in Proteomics

Author(s): Juntao Li, Kanglei Zhou* and Bingyu Mu
Pages: 1-17 (17)
Computational Insights into the Structure and Dynamics of the Human Serotonin Transporter N-terminus by Microsecond Molecular Dynamics

Author(s): Sorin Draga*, Laura Olariu and Speranta Avram
Pages: 1-9 (9)
High Altitude Hypoxia

Author(s): Asma Babar*, Kifayatullah Mengal, Abdul Hanan Babar, Shixin Wu, Mujahid Ali Shah, Chuanfei Xu, Xuegang Luo and Xin Cai
Pages: 1-11 (11)
Pathogenesis of Age-related Cataract: a systematic review of proteomic studies

Author(s): Christina Karakosta*, Argyrios Tzamalis, Michalis Aivaliotis and Ioannis Tsinopoulos
Pages: 1-56 (56)
In silico approach for designing a novel recombinant fusion protein as a Candidate Vaccine against HPV

Author(s): Mohsen Sisakht, Amir Mahmoodzadeh, Mohammadsaeid Zahedi, Davood Rostamzadeh, Amin Moradi Hasan-Abad and Amir Atapour*
Pages: 1-15 (15)
In Silico Vaccine Designing Targeting the Virulence Factors of mce Operons of Mycobacterium avium subsp. Paratuberculosis

Author(s): Taruna Mohinani, Aditya Saxena* and Shoor Vir Singh
Pages: 1-22 (22)
Assessment of new E2 protein domain interaction with PKR protein to control IFN signaling

Author(s): Behzad Dehghani, Tayebeh Hashempour*, Zahra Mousavi, Zahra Hasanshahi, Javad Moayedi and Shahin Merat
Pages: 1-16 (16)
In Silico Analysis of Relative Rareness, Codon Usage, and Enzymesubstrate Docking of Lampyroidea Maculata luciferase

Author(s): Mojtaba Mortazavi*, Saman Hosseinkhani, Masoud Torkzadeh-Mahani, Safa Lotfi, Rahman Emamzadeh and Younes Ghasemi
Pages: 1-10 (10)
A Quantitative Proteomic Analysis to Reveal Effects of N-acetylcysteine on H2O2-induced Cytotoxicity

Author(s): Jong-Moon Park, Van-An Duong, Jeong-Hun Mok, Doo-Jin Choi and Hookeun Lee*
Pages: 1-12 (12)
Haptoglobin Polymorphisms and Fucosylation Change: Possible Influence of Variation on the Identified Lung Cancer-Relevant Biomarkers

Author(s): Kongsak Boonyapranai*, Sakaewan Ounjaijean, Kanokwan Kulprachakarn, Laddawan Potpromanee, Miles Chih-Ming Chen, Hsien-Yu Tsai and Shui-Tien Chen
Pages: 1-10 (10)
Proteomics Analysis of Salt Responsive Proteins in Alfalfa (Medicago sativa L.) Leaves by Two Dimensional Electrophoresis and MALDI-TOF MS

Author(s): Maryam Hosseini, Mahmoud Toorchi*, Mohammad Moghaddam Vahed and Hassan Monirifar
Pages: 1-17 (17)
Designing a Novel Multi-Epitope Vaccine against HTLV-1 Related Adult T-Cell Leukemia/Lymphoma: An In Silico Approach

Author(s): Elnaz Farahi, Mohammad Javad Mokhtari, Younes Ghasemi and Navid Nezafat*
Pages: 1-17 (17)
In Silico Evaluation of Various Signal Peptides to Improve Secretion of Humulin Protein in E. coli Host

Author(s): Soudabe Kavousipour, Mahadi Barazesh, Shiva Mohammadi*, Meghdad Abdollahpour- Alitappeh, Shirzad Fallahi, Amir Shakarami and Zeynab Hajmohammadi
Pages: 1-13 (13)
Cancer Proteomics: New Horizons and Insights into Therapeutic Applications

Author(s): Perumal Subramaniana*, Jaime Jacqueline Jayapalan and Puteri Shafinaz Abdul-Rahmanb
Pages: 1-13 (13)
Molecular Cloning and Structural Insights into Pectin Lyase Proteins from Different Strains of Fusarium

Author(s): Sangeeta Yadav*, Gautam Anand, Vinay K Singh and Dinesh Yadav
Pages: 1-12 (12)
Design, Sar, and Metabolism Study of Crucifereae Family Compound (Spirobrassinin) and its Analogs for Antiangiogenic Potential Targeting Hsp90

Author(s): Neha Sharma, Mohammad Faisal, Abdulrahman A. Alatar, M Kalim A Khan, Saheem Ahmad and Salman Akhtar*
Pages: 1-19 (19)
Random Walks On Biomedical Networks

Author(s): Guiyang Zhang, Pan Wang, You Li and Guohua Huang*
Pages: 1-12 (12)
Mass Spectrometry-based Label-free Quantitative Proteomic Analysis of CCl4-induced Acute Liver Injury in Mice Intervened by Total Glycosides from Ligustri Lucidi Fructus

Author(s): Qian Lu, Hai-Zhu Xing and Nian-Yun Yang*
Pages: 1-11 (11)
Inhibitory as well as Disaggregation Potential of Selected Hydroxy Benzoic Phytochemicals on Hen Egg-White Lysozyme Amyloidogenesis

Author(s): Hitesh Mandal, Arbin Basak, Taraka Prabhu MP, Vidyalatha Kolli and Nandini Sarkar*
Pages: 1-13 (13)
Unique Ncov-2019 (Covid-19) Spike Glycoprotein Processing by Host Protease: Analysis and Implication on Infection

Author(s): Ajoy Basak* and Sarmistha Basak
Pages: 1-8 (8)
RNA-Seq Data Analysis Unveils Potential Conserved Micro-RNAs in Agave Deserti

Author(s): Basit Jabbar, Batcho Agossa Anicet, Muhammad Bilal Sarwar, Bushra Rashid*, Sameera Hassan and Tayyab Husnain
Pages: 1-16 (16)
In Silico Structural and Functional Analyses of Bacillus Uricases

Author(s): Anand Kumar Nelapati, Shubham Meena, Aditya Kumar Singh, Narsimha Bhakta and JagadeeshBabu PonnanEttiyappan*
Pages: 1-19 (19)
Physio-Morphology and Proteomic Attitude of Ziziphus Spina-Christi in Copper-Contaminated Sites in Saudi Arabia: Is It a Candidate Bioremediator?

Author(s): Modhi O. Alotaibi, Afrah E. Mohammed*, Taghreed A. Almutairi, Zakia Shinwari, Ayodele Alaiya and Mudawi M. Elobeid
Pages: 1-14 (14)
Comparative Studies on Phospholipase A2 as a Marker for Gut Microbiota- liver-brain Axis in a rodent Model of Autism

Author(s): Abeer Al-Dbass, Abir Ben Bacha, Nadine MS Moubayed, Ramesa Shafi Bhat, Manar Al-Mutairi, Osima M. Alnakhli, Majidh Al-Mrshoud, Hanan Alfawaz, Maha Daghestani and Afaf El-Ansary*
Pages: 1-9 (9)
Presence of Cathelicidin-1 in Milk as an Indicator of the Severity of Mammary Infection in Ewes

Author(s): Angeliki I. Katsafadou, Natalia G.C. Vasileiou, George T. Tsangaris, Katerina S. Ioannidi, Athanasios K. Anagnostopoulos, Charalambos Billinis, Ilektra A. Fragkou, Elias Papadopoulos, Vasia S. Mavrogianni, Dafni T. Lianou, Dimitris C. Chatzopoulos and George C. Fthenakis*
Pages: 1-7 (7)
Subtype Classification by Polymerase and Gag Genes of HIV-1 Iranian Sequences Registered in the NCBI GenBank

Author(s): Behzad Dehghani, Zahra Hasanshahi, Tayebeh Hashempour* and Parvin Afsar Kazerooni
Pages: 1-9 (9)
Proteomic Investigations to Assess the Impact of Salinity on Vigna radiata L. Genotypes

Author(s): Hesham F. Alharby and Khalid Rehman Hakeem*
Pages: 1-7 (7)
A Multi-Method and Structure-Based In Silico Vaccine Designing Against Helicobacter pylori Employing Immuno-Informatics Approach

Author(s): Anam Naz*, Tahreem Zaheer, Hamza Arshad Dar, Faryal Mehwish Awan, Ayesha Obaid, Shifa Tariq Ashraf, Rehan Zafar Paracha, Arif Malik and Amjad Ali
Pages: 1-11 (11)
Prediction of Prophylactic Peptide Vaccine Candidates for Human Papillomavirus (HPV): Immunoinformatics and Reverse Vaccinology Approaches

Author(s): Mehreen Ismail, Zureesha Sajid, Amjad Ali, Xiaogang Wu, Syed Aun Muhammad* and Rehan Sadiq Shaikh
Pages: 1-15 (15)
Bioinformatics-based Identification of Proteins Expressed by Arthropod- borne Viruses Transmitted by Aedes Aegypti Mosquito

Author(s): Carlos Polanco*, Vladimir N. Uversky, Alberto Huberman, Leire Andrés, Thomas Buhse, Jorge-Alberto Castañón-González and Alma-Fernanda Sánchez-Guerrero
Pages: 1-14 (14)
High-Sensitivity C-Reactive Protein and Lipoprotein-Associated Phospholipase A2 in Predicting Recurrence and Severity of Stenosis in Symptomatic Intracranial Atherosclerotic Disease

Author(s): Soumya Krishnamoorthy , Deepa Damayanthi, Srinivas Gopala, Rejith Paul and P. N. Sylaja*
Pages: 1-6 (6)
Impact of Liver Cancer Somatic Mutations on Protein Structures and Functions

Author(s): Amna Amin Sethi and Nisar Ahmed Shar*
Pages: 1-8 (8)
Analysis of Oxaliplatin Resistance in Colorectal Cancer Cells by Combined Proteomics and Phosphoproteomic

Author(s): Rui Yang, Kunli Feng, Yanhong Cao, Hao Wang and Baolong Wang*
Pages: 1-10 (10)
Soy Protein Remnants Digested by Gastro-duodenal Proteases can Alter Microbial Interactions and Intestinal Cholesterol Absorption

Author(s): Jinkyu Lim *, Juyoung Lee , Yujin Yum , Sung-hee Kim and Dorsilla Anono Katimbwa
Pages: 1-12 (12)
Analysis of the Non-Specific Binding Proteins in the RNA Pull-Down Experiment

Author(s): Yongmei Li*, Baicai Yang, Yali Zhang, Kaiwen Hei and Mingming Xiao
Pages: 1-7 (7)
Proteomic Analysis of the Vitreous Body in Proliferative and Non-Proliferative Diabetic Retinopathy

Author(s): Van-An Duong, Jeeyun Ahn, Na-Young Han, Jong-Moon Park, Jeong-Hun Mok, Tae Wan Kim and Hookeun Lee*
Pages: 1-10 (10)
Computer-Aided Design of a Novel Poly-Epitope Protein in Fusion with an Adjuvant as a Vaccine Candidate Against Leptospirosis

Author(s): Ehsan Rashidian*, Ali Forouharmehr, Narges Nazifi , Amin Jaydari and Nemat Shams
Pages: 1-11 (11)
Physiological and Biochemical Characteristics of Two Soybean Cultivars with Different Seed Vigor During Seed Physiological Maturity

Author(s): Jiaping Wei, Haihong Zhao , Xiaolin Liu, Sushuang Liu, Linzhi Li and Hao Ma*
Pages: 1-10 (10)
Comparative Analysis of Skeleton Muscle Proteome Profile between Yak and Cattle Provides Insight into High-Altitude Adaptation

Author(s): Jin-Wei Xin, Zhi-Xin Chai, Cheng-Fu Zhang, Yu-Mei Yang, Qiang Zhang, Yong Zhu, Han-Wen Cao, Cidan Yang Ji, Jin-Cheng Zhong and Qiu-Mei Ji *
Pages: 1-9 (9)
Association of Mutations in the NS5A-PKRBD Region and IFNL4 Genotypes with Hepatitis C Interferon Responsiveness and its Functional and Structural Analysis

Author(s): Tayebeh Hashempour, Behzad Dehghani, Zahra Mousavi, Tahereh Akbari, Zahra Hasanshahi, Javad Moayedi, Maryam Yahaghi and Mohammad Ali Davarpanah*
Pages: 1-12 (12)
Isolation, Identification and In Silico Study of Native Cellulase Producing Bacteria

Author(s): Farzane Kargar, Mojtaba Mortazavi, Mahmood Maleki, Masoud Torkzadeh Mahani, Younes Ghasemi* and Amir Savardashtaki*
Pages: 1-9 (9)
ABC-Gly: Identifying Protein Lysine Glycation Sites with Artificial Bee Colony Algorithm

Author(s): Yanqiu Yao, Xiaosa Zhao*, Qiao Ning and Junping Zhou
Pages: 1-9 (9)
Label-Free Mass Spectrometry-Based Plasma Proteomics Identified LY6D, DSC3, CDSN, SERPINB12, and SLURP1 as Novel Protein Biomarkers For Pulmonary Tuberculosis

Author(s): Xiaoli Yu, Lu Zhang, Na Li, Peng Hu, Zhaoqin Zhu, Wei Wang, Yanzheng Song, Zilu Wen, Hualin Wang and Shulin Zhang*
Pages: 1-12 (12)
Proteomic Analysis of Differentially Expressed Proteins in Mycobacterium Tuberculosis-Infected Macrophages

Author(s): Shuang Tian, Dongjun Yang, Qian Long and Min Ling*
Pages: 1-6 (6)
iTRAQ-based Quantitative Proteomic Analysis of Dural Tissues Reveals Upregulated Haptoglobin to be a Potential Biomarker of Moyamoya Disease

Author(s): Xiaojun Zhang, Lin Yin, Xiaofang Jia, Yujiao Zhang, Tiefu Liu and Lijun Zhang*
Pages: 1-11 (11)

E-Pub Full Text Articles

Proteomic Analysis of Intra- and Extracellular Proteins of Aspergillus niveus during Submerged Bioprocess Culturing under Different pH Conditions

Identifying protein subcellular location with embedding features learned from networks

A bottom-up proteomic approach in bone marrow plasma cells of newly diagnosed multiple myeloma patients

Neurochemical Changes in Brain After Fetal Exposure to Fluoxetine, a Serotonin Reuptake Inhibitor (SRI) in Rodents

Quantitative Proteomic Study of Peripheral Blood Monocytes Identified Novel Genes Involved in Osteoporosis

ITRAQ-based proteomic analysis of the rat pancreas following gastric bypass surgery

Bioinformatics-based identification of Selective Cationic Amphipatic Antibacterial Peptides: Aurein 1.2 variants case

Comparative Proteome Profiles of Methicillin-Resistant Staphylococcus aureus in Response to Vanillic Acid and 2-Hydroxycinnamic Acid

A Refined Framework for Precision and Translational Proteomics in Clinical Research

Inflammatory Cytokines Correlate with Dry Eye Indexes Estimated by Keratograph in Healthy Subjects

In silico Docking Studies of Vascular Endothelial Growth Factor-A (VEGFA): Possible Implications in Chronic Myeloid Leukemia (CML) Therapy

Machine Learning for Mass Spectrometry Data Analysis in Proteomics

Computational Insights into the Structure and Dynamics of the Human Serotonin Transporter N-terminus by Microsecond Molecular Dynamics

High Altitude Hypoxia

Pathogenesis of Age-related Cataract: a systematic review of proteomic studies

In silico approach for designing a novel recombinant fusion protein as a Candidate Vaccine against HPV

In Silico Vaccine Designing Targeting the Virulence Factors of mce Operons of Mycobacterium avium subsp. Paratuberculosis

Assessment of new E2 protein domain interaction with PKR protein to control IFN signaling

In Silico Analysis of Relative Rareness, Codon Usage, and Enzymesubstrate Docking of Lampyroidea Maculata luciferase

A Quantitative Proteomic Analysis to Reveal Effects of N-acetylcysteine on H2O2-induced Cytotoxicity

Haptoglobin Polymorphisms and Fucosylation Change: Possible Influence of Variation on the Identified Lung Cancer-Relevant Biomarkers

Proteomics Analysis of Salt Responsive Proteins in Alfalfa (Medicago sativa L.) Leaves by Two Dimensional Electrophoresis and MALDI-TOF MS

Designing a Novel Multi-Epitope Vaccine against HTLV-1 Related Adult T-Cell Leukemia/Lymphoma: An In Silico Approach

In Silico Evaluation of Various Signal Peptides to Improve Secretion of Humulin Protein in E. coli Host

Cancer Proteomics: New Horizons and Insights into Therapeutic Applications

Molecular Cloning and Structural Insights into Pectin Lyase Proteins from Different Strains of Fusarium

Design, Sar, and Metabolism Study of Crucifereae Family Compound (Spirobrassinin) and its Analogs for Antiangiogenic Potential Targeting Hsp90

Random Walks On Biomedical Networks

Mass Spectrometry-based Label-free Quantitative Proteomic Analysis of CCl4-induced Acute Liver Injury in Mice Intervened by Total Glycosides from Ligustri Lucidi Fructus

Inhibitory as well as Disaggregation Potential of Selected Hydroxy Benzoic Phytochemicals on Hen Egg-White Lysozyme Amyloidogenesis

Unique Ncov-2019 (Covid-19) Spike Glycoprotein Processing by Host Protease: Analysis and Implication on Infection

RNA-Seq Data Analysis Unveils Potential Conserved Micro-RNAs in Agave Deserti

In Silico Structural and Functional Analyses of Bacillus Uricases

Physio-Morphology and Proteomic Attitude of Ziziphus Spina-Christi in Copper-Contaminated Sites in Saudi Arabia: Is It a Candidate Bioremediator?

Comparative Studies on Phospholipase A2 as a Marker for Gut Microbiota- liver-brain Axis in a rodent Model of Autism

Presence of Cathelicidin-1 in Milk as an Indicator of the Severity of Mammary Infection in Ewes

Subtype Classification by Polymerase and Gag Genes of HIV-1 Iranian Sequences Registered in the NCBI GenBank

Proteomic Investigations to Assess the Impact of Salinity on Vigna radiata L. Genotypes

A Multi-Method and Structure-Based In Silico Vaccine Designing Against Helicobacter pylori Employing Immuno-Informatics Approach

Prediction of Prophylactic Peptide Vaccine Candidates for Human Papillomavirus (HPV): Immunoinformatics and Reverse Vaccinology Approaches

Bioinformatics-based Identification of Proteins Expressed by Arthropod- borne Viruses Transmitted by Aedes Aegypti Mosquito

High-Sensitivity C-Reactive Protein and Lipoprotein-Associated Phospholipase A2 in Predicting Recurrence and Severity of Stenosis in Symptomatic Intracranial Atherosclerotic Disease

Impact of Liver Cancer Somatic Mutations on Protein Structures and Functions

Analysis of Oxaliplatin Resistance in Colorectal Cancer Cells by Combined Proteomics and Phosphoproteomic

Soy Protein Remnants Digested by Gastro-duodenal Proteases can Alter Microbial Interactions and Intestinal Cholesterol Absorption

Analysis of the Non-Specific Binding Proteins in the RNA Pull-Down Experiment

Proteomic Analysis of the Vitreous Body in Proliferative and Non-Proliferative Diabetic Retinopathy

Computer-Aided Design of a Novel Poly-Epitope Protein in Fusion with an Adjuvant as a Vaccine Candidate Against Leptospirosis

Physiological and Biochemical Characteristics of Two Soybean Cultivars with Different Seed Vigor During Seed Physiological Maturity

Comparative Analysis of Skeleton Muscle Proteome Profile between Yak and Cattle Provides Insight into High-Altitude Adaptation

Association of Mutations in the NS5A-PKRBD Region and IFNL4 Genotypes with Hepatitis C Interferon Responsiveness and its Functional and Structural Analysis

Isolation, Identification and In Silico Study of Native Cellulase Producing Bacteria

ABC-Gly: Identifying Protein Lysine Glycation Sites with Artificial Bee Colony Algorithm

Label-Free Mass Spectrometry-Based Plasma Proteomics Identified LY6D, DSC3, CDSN, SERPINB12, and SLURP1 as Novel Protein Biomarkers For Pulmonary Tuberculosis

Proteomic Analysis of Differentially Expressed Proteins in Mycobacterium Tuberculosis-Infected Macrophages

iTRAQ-based Quantitative Proteomic Analysis of Dural Tissues Reveals Upregulated Haptoglobin to be a Potential Biomarker of Moyamoya Disease